PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000416279
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 586aa    MW: 63436.6 Da    PI: 6.7941
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000416279genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86e-30263322159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r aed +++++tYeg+Hnh+
  MDP0000416279 263 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVQRFAEDISILITTYEGTHNHP 322
                    58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-31248324IPR003657WRKY domain
SuperFamilySSF1182904.58E-27256324IPR003657WRKY domain
PROSITE profilePS5081128.392258324IPR003657WRKY domain
SMARTSM007742.1E-34263323IPR003657WRKY domain
PfamPF031062.8E-26264322IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MEAASGKSNS HGGSEMEEER IVLESSSIAD DQEAGYKEDI IVLKMSTTSN IKGSSAEPDH  60
SVASTSSSLK EXDYQLESAR AEMGEVREEN QRLKKYLDRI TEDYQTLQMQ FYDIQQKANK  120
SKDIAIPSTI KKYNQDEESE LVSLSLGSFS GKPKWNQKND KNPSTSQGNV ENESDGESLS  180
LGLDCKYELA AKSSAXTDQV PLANPSPGSS LEEVPKEEAG KTWQPKKVLK TXRSSAIEDE  240
VAQQSPAKKA RVSVRARCDT PTMNDGCQWR KYGQKIAKGN PCPRAYYRCT IAPSCPVRKQ  300
VQRFAEDISI LITTYEGTHN HPLPMSATAM ASTTSAAASM XLSGSSSSSS GSLNPSTTAA  360
HDLHGYNFYL SDNSKSRFYT PNSSLSSSLP TITLDLTSNP SSTSNSLSHL NKFSSSSSSS  420
SRQLYPSTSH NFGSNSESNT NISWRTPLPP YNISNKNQIA PLSSLGIRQQ PLQNSMYQNY  480
MQKNINPNPN PHQGVPHQFQ PDSIAAATKA ITSDPSFQSA LAAALTSIIG NNSTVGTTGI  540
TGTLGHLKQA DGGDSSISLA QKFKWSDHFP XSTTAFSIPS VTDRE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-20250324174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009369335.10.0PREDICTED: probable WRKY transcription factor 61 isoform X2
TrEMBLM5WYQ60.0M5WYQ6_PRUPE; Uncharacterized protein
STRINGPOPTR_0015s07530.11e-143(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-63WRKY DNA-binding protein 72